Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_507

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_506: 8874 - K08793 STK32, YANK serine/threonine kinase 32, at 1203196 to 1205360 8874 mRNA_507: 8875 - K19347 SUN1_2 SUN domain-containing protein 1/2, at 1206155 to 1210007 8875 mRNA_508: 8876 - K16466 CETN3, CDC31 centrin-3, at 1210355 to 1211163 8876

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,205,497 - 1.1
1,205,797 - 0.2
1,207,301 + 8875 mRNA_507 0.30 1.6
1,207,910 - 8875 mRNA_507 0.46 -0.4
1,209,409 + 8875 mRNA_507 0.84 0.9
1,209,898 + -0.7