Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_454

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_453: 8821 - SUPERFAMILY--SSF52047, at 1055222 to 1056818 8821 mRNA_454: 8822 - Hypothetical Protein, at 1057192 to 1059678 8822 mRNA_455: 8823 - KOG1745 Histones H3 and H4, at 1060190 to 1060901 8823

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,056,525 + 8821 mRNA_453 0.82 2.9
1,056,543 + 8821 mRNA_453 0.83 0.4
1,056,571 + 8821 mRNA_453 0.84 -0.3
1,056,791 - 1.3
1,056,804 - 1.6
1,056,812 + 1.5
1,056,819 - -0.9
1,056,914 - 1.1
1,056,958 + -3.2
1,056,973 - 3.0
1,056,976 + 0.3
1,057,122 + 0.5
1,057,123 + 1.5
1,057,286 - 1.6
1,057,997 - 8822 mRNA_454 0.32 0.1
1,058,034 - 8822 mRNA_454 0.34 -1.0
1,058,034 - 8822 mRNA_454 0.34 0.2
1,058,104 - 8822 mRNA_454 0.37 -1.1
1,058,121 + 8822 mRNA_454 0.37 -0.5
1,058,211 + 8822 mRNA_454 0.41 1.0
1,058,361 - 8822 mRNA_454 0.47 0.4
1,058,361 - 8822 mRNA_454 0.47 2.3
1,058,499 + 8822 mRNA_454 0.53 1.2
1,058,964 + 8822 mRNA_454 0.71 0.5
1,059,149 + 8822 mRNA_454 0.79 -2.1
1,059,243 + 8822 mRNA_454 0.82 -0.5
1,059,358 - 8822 mRNA_454 0.87 1.6
1,060,029 - -0.9
1,060,176 - -0.1
1,060,181 - 2.4
1,060,320 + 8823 mRNA_455 0.18 -1.5