Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_421

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_420: 8788 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 981514 to 982786 8788 mRNA_421: 8789 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 983035 to 984157 8789 mRNA_422: 8790 - KOG0911 Glutaredoxin-related protein, at 984573 to 985710 8790

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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982,477 - 8788 mRNA_420 0.76 2.4
982,595 - 8788 mRNA_420 0.85 0.6
982,629 + 8788 mRNA_420 0.88 2.0
982,878 + -1.7
982,903 - 1.0
982,924 + 1.3
982,926 - 0.5
982,930 + 3.4
982,941 + -0.7
982,941 - 0.8
982,945 - 2.1
982,971 + 0.1
983,087 - -0.8
983,240 - 8789 mRNA_421 0.18 2.2
983,369 + 8789 mRNA_421 0.30 0.1
983,645 + 8789 mRNA_421 0.54 0.4
983,796 - 8789 mRNA_421 0.68 0.4
983,924 - 8789 mRNA_421 0.79 -1.2
984,063 - 1.4
984,096 + -0.3
984,206 - -1.4
984,485 - -0.0
984,515 + 2.9
984,647 + 0.1