Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_420

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_419: 8787 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 979163 to 981247 8787 mRNA_420: 8788 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 981514 to 982786 8788 mRNA_421: 8789 - K11209 yghU, yfcG GSH-dependent disulfide-bond oxidoreductase, at 983035 to 984157 8789

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
980,578 - 8787 mRNA_419 0.68 -0.4
980,696 - 8787 mRNA_419 0.74 0.1
980,702 + 8787 mRNA_419 0.74 0.3
980,996 + 8787 mRNA_419 0.88 0.6
981,004 - 8787 mRNA_419 0.88 -2.6
981,013 - 8787 mRNA_419 0.89 -0.3
981,135 + 0.3
981,140 + -1.1
981,141 - 1.6
981,147 + 0.1
981,156 - 0.1
981,158 + 1.6
981,306 + 0.8
981,306 + -0.7
981,440 + 0.1
981,589 + 2.2
981,631 - -0.3
981,875 + 8788 mRNA_420 0.28 2.0
981,882 - 8788 mRNA_420 0.29 -1.9
981,984 - 8788 mRNA_420 0.37 1.5
982,477 - 8788 mRNA_420 0.76 2.4
982,595 - 8788 mRNA_420 0.85 0.6
982,629 + 8788 mRNA_420 0.88 2.0
982,878 + -1.7
982,903 - 1.0
982,924 + 1.3
982,926 - 0.5
982,930 + 3.4
982,941 + -0.7
982,941 - 0.8
982,945 - 2.1
982,971 + 0.1
983,087 - -0.8
983,240 - 8789 mRNA_421 0.18 2.2
983,369 + 8789 mRNA_421 0.30 0.1
983,645 + 8789 mRNA_421 0.54 0.4