Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_397

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_396: 8764 - K07478 ycaJ putative ATPase, at 921691 to 924142 8764 mRNA_397: 8765 - SUPERFAMILY--SSF52047, at 924312 to 925720 8765 mRNA_398: 8766 - KOG1305 Amino acid transporter protein, at 925990 to 928121 8766

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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923,518 - 8764 mRNA_396 0.75 0.7
923,546 - 8764 mRNA_396 0.76 0.6
923,553 - 8764 mRNA_396 0.76 0.0
924,076 - 0.3
924,126 - 1.5
924,389 - -0.3
924,518 - 8765 mRNA_397 0.15 -0.7
924,536 - 8765 mRNA_397 0.16 -1.3
924,542 + 8765 mRNA_397 0.16 1.8
924,560 + 8765 mRNA_397 0.18 0.3
924,650 + 8765 mRNA_397 0.24 -0.6
924,783 - 8765 mRNA_397 0.33 -1.5
924,994 + 8765 mRNA_397 0.48 2.2
925,442 - 8765 mRNA_397 0.80 0.9
925,578 - 8765 mRNA_397 0.90 1.5
925,853 - -0.1
925,858 - -0.6
925,859 + 0.2
925,875 - -2.6
925,876 - 0.1
925,876 + 0.3
925,883 - -0.4
925,889 + 0.1
925,890 - 0.7
925,995 - 1.7
926,030 - 0.0
926,154 + -1.4
926,167 - -0.8
926,462 + 8766 mRNA_398 0.22 1.0
926,556 + 8766 mRNA_398 0.27 2.6
926,594 + 8766 mRNA_398 0.28 -0.1
926,615 - 8766 mRNA_398 0.29 0.1