Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_374

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_373: 8741 - KOG2542 Uncharacterized conserved protein (YdiU family), at 866989 to 869456 8741 mRNA_374: 8742 - Hypothetical Protein, at 869694 to 870348 8742 mRNA_375: 8743 - HMMPfam-Cytidine and deoxycytidylate deaminase zinc-binding region-PF00383,ProSitePatterns-Cytidine and deoxycytidylate deaminases zinc-binding region signature.-PS00903,SUPERFAMILY--SSF53927, at 870783 to 871769 8743

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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868,812 + 8741 mRNA_373 0.74 0.7
868,928 - 8741 mRNA_373 0.79 0.9
869,218 + 0.8
869,383 + 1.3
869,795 + 8742 mRNA_374 0.15 -1.8
870,258 - 8742 mRNA_374 0.86 2.9
870,366 - -0.2
870,385 - -0.0
870,386 + -0.5
870,402 - -0.2
870,409 - 0.8
870,519 - 0.4
870,539 - 1.2
870,550 + 0.8
870,677 + -0.9
870,808 - -1.7
870,818 - -0.3
870,847 - -0.8
870,855 + -1.7
870,981 + 8743 mRNA_375 0.20 0.9