Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_373

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_372: 8740 - BLAST arsenical pump membrane protein [Exophiala dermat..., at 864831 to 866823 8740 mRNA_373: 8741 - KOG2542 Uncharacterized conserved protein (YdiU family), at 866989 to 869456 8741 mRNA_374: 8742 - Hypothetical Protein, at 869694 to 870348 8742

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
866,565 - 8740 mRNA_372 0.87 1.0
866,689 - -0.5
866,694 - 1.8
866,701 + -0.4
866,710 - 1.0
866,715 + 2.5
866,723 + 2.0
866,725 + 0.7
866,856 - 0.2
866,857 + 1.3
866,861 + 0.5
866,862 + -0.7
866,866 - 1.5
866,871 + 0.6
866,872 - -1.4
866,872 - -0.4
866,872 - -1.4
866,872 - 0.8
866,874 + -1.0
866,878 + 0.5
866,883 - 0.0
866,890 - 2.2
866,894 + -0.5
867,004 - 0.5
867,014 - -0.9
867,015 - 0.9
867,020 + 0.0
867,022 - 0.8
867,027 - 0.3
867,030 - 1.3
867,034 + 1.7
867,038 + 0.7
867,043 - 1.3
867,054 - 0.8
867,162 + 0.4
867,181 - 2.1
867,451 - 8741 mRNA_373 0.19 1.0
867,484 + 8741 mRNA_373 0.20 -0.7
867,647 - 8741 mRNA_373 0.27 -0.1
867,905 + 8741 mRNA_373 0.37 0.9
867,919 + 8741 mRNA_373 0.38 1.9
868,081 + 8741 mRNA_373 0.44 1.4
868,179 - 8741 mRNA_373 0.48 -0.6
868,351 + 8741 mRNA_373 0.55 0.4
868,369 - 8741 mRNA_373 0.56 0.0
868,643 + 8741 mRNA_373 0.67 0.2
868,812 + 8741 mRNA_373 0.74 0.7
868,928 - 8741 mRNA_373 0.79 0.9
869,218 + 0.8
869,383 + 1.3
869,795 + 8742 mRNA_374 0.15 -1.8
870,258 - 8742 mRNA_374 0.86 2.9
870,366 - -0.2
870,385 - -0.0
870,386 + -0.5
870,402 - -0.2
870,409 - 0.8