Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_367

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_366: 8734 - HMMPfam-Thioredoxin-like-PF13905,SUPERFAMILY--SSF52833, at 849261 to 850411 8734 mRNA_367: 8735 - ProSiteProfiles-TPR repeat region circular profile.-PS50293,SMART-Tetratricopeptide repeats-SM00028,SUPERFAMILY--SSF48452, at 850981 to 853734 8735 mRNA_368: 8736 - KOG2100 Dipeptidyl aminopeptidase, at 853834 to 856786 8736

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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850,015 - 8734 mRNA_366 0.66 0.6
850,162 - 8734 mRNA_366 0.78 -0.1
850,460 - 0.2
850,470 + 0.9
850,483 + -0.9
850,486 + 1.6
850,599 - 0.7
850,605 - 0.0
850,619 - -0.7
850,621 + 4.3
850,751 + 0.7
850,776 - 1.0
850,783 - 0.1
850,791 + 2.3
850,795 - -0.3
850,810 - 0.3
850,814 + 0.9
850,817 - 4.9
850,828 + -0.6
850,932 + -1.7
851,013 + 0.7
851,084 + 1.5
851,144 - 1.0
851,255 - 1.1
851,651 - 8735 mRNA_367 0.24 -0.1
851,671 - 8735 mRNA_367 0.25 0.4
851,683 + 8735 mRNA_367 0.25 -0.2
851,732 - 8735 mRNA_367 0.27 -1.4
851,920 - 8735 mRNA_367 0.34 0.7
851,950 - 8735 mRNA_367 0.35 0.7
852,092 + 8735 mRNA_367 0.40 2.6
852,544 - 8735 mRNA_367 0.57 1.2
853,299 + 8735 mRNA_367 0.84 1.3
853,611 - 3.1
854,038 + -1.6
854,069 + -1.5
854,183 - 8736 mRNA_368 0.12 -1.0
854,317 + 8736 mRNA_368 0.16 -0.1