Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_362

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_362: 8730 - HMMPfam-CENP-S associating Centromere protein X-PF09415,SUPERFAMILY--SSF47113, at 842601 to 843076 8730 mRNA_363: 8731 - K14776 DDX10, DBP4 ATP-dependent RNA helicase DDX10/DBP4, at 843227 to 846125 8731

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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841,662 + 1.6
841,664 + 1.9
841,678 + -1.2
841,684 + -0.6
841,686 - 0.6
841,704 + 0.2
841,717 - -0.0
841,753 - -0.1
841,754 + -0.0
841,766 - -0.2
841,797 + -0.3
841,797 + -0.8
841,812 + -0.3
841,818 + 2.5
841,818 + -0.2
841,822 - 0.4
842,154 + -0.1
842,301 - -0.3
842,710 - 8730 mRNA_362 0.23 0.2
842,852 - 8730 mRNA_362 0.53 1.4
842,863 + 8730 mRNA_362 0.55 0.4
842,868 + 8730 mRNA_362 0.56 -0.5
842,998 - 8730 mRNA_362 0.83 0.0
843,005 + 8730 mRNA_362 0.85 2.4
843,015 - 8730 mRNA_362 0.87 1.4
843,142 - 0.6
843,154 - -0.5
843,160 + 3.7
843,172 + 2.3
843,176 - 3.0
843,183 - 1.0