Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_333

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_332: 8700 - HMMPfam-DSS1/SEM1 family-PF05160, at 788095 to 788775 8700 mRNA_333: 8701 - Hypothetical Protein, at 789358 to 791102 8701

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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788,796 + -3.1
788,806 - 2.3
788,807 + 1.6
788,827 + 4.1
788,829 + 0.2
788,958 - 0.7
788,959 + 0.6
789,091 + -0.4
789,119 - 2.6
789,187 - 1.1
789,204 - 0.7
789,238 - -1.4
789,683 + 8701 mRNA_333 0.19 -0.7
789,694 - 8701 mRNA_333 0.19 -0.0
789,855 - 8701 mRNA_333 0.28 -0.8
790,108 - 8701 mRNA_333 0.43 2.5
790,133 + 8701 mRNA_333 0.44 2.5
790,250 + 8701 mRNA_333 0.51 -0.3
790,255 + 8701 mRNA_333 0.51 0.9
790,270 - 8701 mRNA_333 0.52 0.0
790,420 + 8701 mRNA_333 0.61 0.5
790,536 - 8701 mRNA_333 0.68 1.4
790,577 + 8701 mRNA_333 0.70 0.6
790,832 + 8701 mRNA_333 0.84 0.5
790,838 - 8701 mRNA_333 0.85 1.3
790,854 - 8701 mRNA_333 0.86 0.5
790,866 + 8701 mRNA_333 0.86 0.5
790,994 + 0.4
790,997 - 1.6
791,010 - 1.0
791,014 - 0.1
791,022 + 0.1
791,147 + -0.2
791,150 + 0.9
791,157 - -0.4
791,158 - -0.6
791,167 + 0.4
791,168 + -0.3
791,170 + -0.7
791,177 + -0.9
791,292 + 0.1
791,298 - 1.0
791,299 - 2.0
791,303 + 1.4
791,311 - 0.7
791,311 - -0.3
791,314 + -2.6
791,314 + 1.3
791,317 - 1.7
791,321 + 0.3
791,329 - -0.2
791,416 - 0.4
791,435 - -0.2
791,437 + 0.1
791,439 + 0.5
791,441 - -1.2
791,445 - 0.8
791,449 + 1.8
791,450 + 0.7
791,452 - -0.2
791,455 - 0.1
791,462 + -0.8
791,475 - 1.3
791,483 - 0.4
791,489 + 1.0
791,494 - 0.1
791,496 - -0.2
791,496 - 0.4
791,497 + 0.3
791,513 - 0.1
791,514 + 0.3
791,522 - -1.5
791,532 - 0.8
791,533 + 1.1
791,536 - -0.2
791,551 + 0.8
791,618 - 0.5
791,627 - 0.3
791,631 - 1.4
791,641 - 0.6
791,644 + -0.1
791,645 + -1.6
791,649 + -0.9
791,653 - 1.9
791,653 + -0.6
791,660 - -0.0
791,666 - -1.2
791,670 - 2.2
791,674 + -1.6
791,685 - -0.1
791,693 + 0.1
791,697 + -0.7
791,706 - 0.1
791,725 - 1.1
791,731 + 1.4
791,732 + 1.8
791,733 - 0.3
791,749 - 1.9
791,762 + 0.0
791,909 - -1.5
791,916 - -0.2
791,918 + 0.2
792,054 + -0.0
792,068 - -0.3