Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_295

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_294: 8662 - Hypothetical Protein, at 694833 to 695851 8662 mRNA_295: 8663 - KOG3069 Peroxisomal NUDIX hydrolase, at 696083 to 698097 8663 mRNA_296: 8664 - K20177 VPS3, TGFBRAP1 vacuolar protein sorting-associated protein 3, at 698223 to 702275 8664

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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695,838 - 1.8
695,949 - 0.4
695,975 - -0.4
696,010 - -0.5
696,038 + 3.1
696,272 - -0.6
696,560 - 8663 mRNA_295 0.24 0.2
696,579 - 8663 mRNA_295 0.25 1.0
696,735 - 8663 mRNA_295 0.32 0.8
697,138 + 8663 mRNA_295 0.52 -0.1
697,166 - 8663 mRNA_295 0.54 0.0
697,472 + 8663 mRNA_295 0.69 1.6
697,479 - 8663 mRNA_295 0.69 0.1
697,496 + 8663 mRNA_295 0.70 0.1
697,604 + 8663 mRNA_295 0.75 2.3
697,608 - 8663 mRNA_295 0.76 1.9
697,733 - 8663 mRNA_295 0.82 0.4
697,741 + 8663 mRNA_295 0.82 -2.6
697,751 - 8663 mRNA_295 0.83 0.4
697,762 - 8663 mRNA_295 0.83 0.5
697,896 - 0.5
697,906 - 1.4
698,034 + 0.4
698,174 - 0.7
698,177 + -1.3
698,189 + 2.1
698,194 + 0.6
698,199 + -0.1
698,203 + 1.3