Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_194

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_194: 8562 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 473851 to 475704 8562 mRNA_195: 8563 - K14570 REX1, REXO1, RNH70 RNA exonuclease 1, at 475882 to 478455 8563

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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472,879 + -0.6
472,892 - 0.0
472,894 + 1.4
473,064 - 1.2
473,084 - 1.1
473,085 - -1.3
473,093 + -2.0
473,102 + 1.7
473,102 - 2.6
473,111 - 0.7
473,115 + -1.3
473,154 - -2.2
473,169 + -0.7
473,169 - 1.6
473,176 + 0.5
473,188 + -0.4
473,188 - -0.1
473,193 + 0.6
473,199 + 2.7
473,210 - -0.0
473,211 + -1.4
473,224 + -0.4
473,228 + 2.2
473,230 - -0.7
473,231 - -0.1
473,239 - 0.9
473,243 + -0.3
473,244 + 1.9
473,247 + 1.2
473,250 + -0.4
473,269 + 0.5
473,280 + 0.7
473,283 - -0.2
473,297 - -0.1
473,302 + 0.7
473,323 - 0.2
473,351 - 0.7
473,358 - -0.3
473,365 - -0.3
473,368 + 0.9
473,393 - -0.5
473,394 + -0.2
473,403 + 0.2
473,406 - -1.5
473,414 + 0.8
473,425 + 1.9
473,466 + 2.1
473,474 - -0.4
473,479 + 2.8
473,482 - 1.0
473,489 - 0.7
473,503 - -0.2
473,509 + 0.0
473,510 - 0.7
473,523 - 1.3
473,545 - 0.2
473,578 - 0.2
473,610 - -0.3
473,611 + -0.3
473,658 + 0.7
473,671 + -1.2
473,695 - 0.3
473,718 - 0.9
473,770 - 1.8
473,790 - -1.7
473,796 - 1.3
473,972 + -0.1
473,981 + -0.6
474,194 + 8562 mRNA_194 0.19 0.8
474,215 - 8562 mRNA_194 0.20 -0.9
474,254 + 8562 mRNA_194 0.22 -1.9
474,664 + 8562 mRNA_194 0.44 -0.5
474,674 + 8562 mRNA_194 0.44 2.4
474,961 - 8562 mRNA_194 0.60 0.1
475,410 - 8562 mRNA_194 0.84 0.2
475,696 - -0.0
475,722 - 0.3
475,755 + -0.2