Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_159

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_158: 8526 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 392732 to 393571 8526 mRNA_159: 8527 - Hypothetical Protein, at 394494 to 395592 8527 mRNA_160: 8528 - K05349 bglX beta-glucosidase, at 396327 to 398883 8528

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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393,929 - 1.5
393,963 + 0.0
393,967 - 1.5
394,007 + -0.5
394,047 - 1.6
394,061 + -0.0
394,070 + 0.9
394,221 + -1.0
394,222 - 0.4
394,223 - 0.7
394,226 - -0.6
394,228 + 0.4
394,228 + 1.8
394,234 - -0.3
394,236 + 0.3
394,242 - -0.2
394,252 - 1.4
394,259 + 0.4
394,260 + 0.1
394,260 + 0.9
394,263 - 0.2
394,265 + 1.1
394,265 - 0.4
394,288 - 1.9
394,306 - 0.5
394,333 + 2.0
394,361 - -0.6
394,363 + 0.6
394,375 - 0.3
394,375 - 2.0
394,375 - -0.3
394,382 + -0.2
394,382 + -1.5
394,383 - -0.7
394,399 - 1.2
394,407 + 2.2
394,411 - 0.5
394,413 + -0.4
394,419 + 0.9
394,438 - 0.3
394,444 + 0.5
394,445 - 1.2
394,558 - 0.3
394,568 + 0.0
394,570 + 1.8
394,683 - 8527 mRNA_159 0.17 0.7
394,698 + 8527 mRNA_159 0.19 -0.2
394,850 - 8527 mRNA_159 0.32 0.5
394,868 + 8527 mRNA_159 0.34 2.2
394,966 + 8527 mRNA_159 0.43 1.5
395,058 - 8527 mRNA_159 0.51 0.1
395,125 - 8527 mRNA_159 0.57 0.1
395,573 + 0.2
395,686 + -0.0
396,176 + 1.5