Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_158

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_157: 8525 - KOG3066 Translin-associated protein X, at 391378 to 392552 8525 mRNA_158: 8526 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 392732 to 393571 8526 mRNA_159: 8527 - Hypothetical Protein, at 394494 to 395592 8527

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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391,740 - 8525 mRNA_157 0.31 -1.8
391,776 - 8525 mRNA_157 0.34 2.0
392,222 - 8525 mRNA_157 0.72 1.9
392,255 - 8525 mRNA_157 0.75 0.4
392,641 - -0.8
392,768 - 2.5
393,026 - 8526 mRNA_158 0.35 -1.3
393,249 + 8526 mRNA_158 0.62 0.3
393,362 - 8526 mRNA_158 0.75 0.3
393,929 - 1.5
393,963 + 0.0
393,967 - 1.5
394,007 + -0.5
394,047 - 1.6
394,061 + -0.0
394,070 + 0.9
394,221 + -1.0
394,222 - 0.4
394,223 - 0.7
394,226 - -0.6
394,228 + 0.4
394,228 + 1.8
394,234 - -0.3
394,236 + 0.3
394,242 - -0.2
394,252 - 1.4
394,259 + 0.4
394,260 + 0.1
394,260 + 0.9
394,263 - 0.2
394,265 + 1.1
394,265 - 0.4
394,288 - 1.9
394,306 - 0.5
394,333 + 2.0
394,361 - -0.6
394,363 + 0.6
394,375 - 0.3
394,375 - 2.0
394,375 - -0.3
394,382 + -0.2
394,382 + -1.5
394,383 - -0.7
394,399 - 1.2
394,407 + 2.2
394,411 - 0.5
394,413 + -0.4
394,419 + 0.9
394,438 - 0.3
394,444 + 0.5
394,445 - 1.2
394,558 - 0.3
394,568 + 0.0
394,570 + 1.8