Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_156

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_155: 8523 - K20069 NECAP1_2 adaptin ear-binding coat-associated protein 1/2, at 388626 to 389791 8523 mRNA_156: 8524 - Hypothetical Protein, at 390124 to 390698 8524 mRNA_157: 8525 - KOG3066 Translin-associated protein X, at 391378 to 392552 8525

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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389,314 + 8523 mRNA_155 0.59 -1.3
389,341 - 8523 mRNA_155 0.61 -0.6
389,435 + 8523 mRNA_155 0.69 0.4
389,578 + 8523 mRNA_155 0.82 -1.0
389,884 + -0.6
389,902 + -0.0
389,911 + -0.3
390,178 + 0.6
390,182 + 8524 mRNA_156 0.10 2.0
390,283 - 8524 mRNA_156 0.28 0.2
390,482 - 8524 mRNA_156 0.62 0.1
390,609 - 8524 mRNA_156 0.84 0.7
390,880 - -0.1
390,882 + -0.2
390,886 - 0.0
390,898 - 0.4
391,195 + 0.8
391,614 - 8525 mRNA_157 0.20 -0.9
391,615 + 8525 mRNA_157 0.20 0.9
391,654 + 8525 mRNA_157 0.23 1.9