Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_97

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_96: 8464 - KOG4031 Vesicle coat protein clathrin, light chain, at 228445 to 229589 8464 mRNA_97: 8465 - KOG2234 Predicted UDP-galactose transporter, at 229785 to 233167 8465 mRNA_98: 8466 - Hypothetical Protein, at 233874 to 234659 8466

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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229,618 - 0.6
229,618 + 1.9
229,681 - 0.8
229,688 + 1.9
230,132 + 8465 mRNA_97 0.10 0.6
230,155 - 8465 mRNA_97 0.11 1.2
230,173 + 8465 mRNA_97 0.11 0.5
230,329 + 8465 mRNA_97 0.16 1.5
230,399 - 8465 mRNA_97 0.18 -0.2
230,575 - 8465 mRNA_97 0.23 0.1
230,744 + 8465 mRNA_97 0.28 0.1
230,750 - 8465 mRNA_97 0.29 1.0
231,010 - 8465 mRNA_97 0.36 0.0
231,079 - 8465 mRNA_97 0.38 -1.6
231,190 - 8465 mRNA_97 0.42 -0.6
231,279 - 8465 mRNA_97 0.44 1.0
231,476 + 8465 mRNA_97 0.50 -0.5
231,641 - 8465 mRNA_97 0.55 -0.4
231,800 - 8465 mRNA_97 0.60 -0.2
232,261 + 8465 mRNA_97 0.73 0.1
232,277 - 8465 mRNA_97 0.74 -1.5
232,833 - -1.0
232,980 + -1.9
232,995 - -0.2
233,157 - 0.1
233,237 + 0.8
233,256 - -1.3
233,256 - -1.0
233,263 - 1.0
233,276 + -0.3
233,282 - 3.2
233,290 + 3.7
233,290 + -1.2
233,290 + 0.1
233,298 - -0.5
233,298 + 0.1
233,298 - 0.4
233,301 + 1.2
233,301 - 2.6
233,301 - 0.1
233,302 + -0.8
233,315 + -0.1
233,316 - 0.2
233,316 + 0.3
233,317 - -0.4
233,317 - -1.8
233,319 - 0.4
233,320 - -0.1
233,321 + 1.5
233,321 - 0.6
233,321 - 0.2
233,323 - 1.2
233,323 - 0.2
233,324 + 0.0
233,324 + 0.2
233,325 + -0.0
233,325 - -0.1
233,326 + -0.5
233,329 + 0.7
233,332 + -1.4
233,335 + 1.0
233,336 + 0.4
233,337 + 0.4
233,337 + 0.8
233,350 + 2.7
233,350 + -1.0
233,354 - -0.5
233,359 + 0.5
233,365 - 0.6
233,365 - 0.6
233,365 + 0.5
233,375 - -0.4
233,379 + 0.3
233,383 + 0.2
233,387 - 0.6
233,404 + -0.3
233,404 + 0.5
233,408 - 1.6
233,436 - 0.9
233,436 - 0.8
233,436 - -0.7
233,437 - 0.7
233,441 + 1.0
233,442 - 0.3
233,443 - 1.7
233,444 + 0.2
233,446 - -0.2
233,448 - 1.3
233,450 + -2.2
233,451 + 1.6
233,452 + 2.1
233,459 - -2.0
233,488 - -0.2
233,491 - -1.6
233,507 + 0.6
233,512 - 1.3
233,518 - 0.6
233,520 - 1.6
233,523 + -1.1
233,529 - -1.3
233,539 - 0.2
233,541 + 0.9
233,549 + 1.7
233,551 + -0.8
233,559 - 2.0
233,560 + -0.6
233,568 + 0.9
233,571 - 3.2
233,573 + -1.2
233,613 + -1.0
233,657 - 0.9
233,706 + 0.6
233,726 + -1.6
233,851 - -0.8
233,852 + 2.2
233,859 - -0.1
233,865 + 0.0
234,006 - 8466 mRNA_98 0.17 1.6
234,139 - 8466 mRNA_98 0.34 1.3