Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_80

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_79: 8447 - K04906 KCNH3 potassium voltage-gated channel Eag-related subfamily H member 3, at 186706 to 188932 8447 mRNA_80: 8448 - K04911 KCNH8 potassium voltage-gated channel Eag-related subfamily H member 8, at 189215 to 191649 8448 mRNA_81: 8449 - K12176 COPS2, CSN2, TRIP15 COP9 signalosome complex subunit 2, at 191913 to 194364 8449

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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188,292 - 8447 mRNA_79 0.71 -1.1
188,304 - 8447 mRNA_79 0.72 -1.4
188,379 - 8447 mRNA_79 0.75 -1.6
188,544 + 8447 mRNA_79 0.83 -0.9
188,707 + 8447 mRNA_79 0.90 1.3
188,895 - 0.1
188,904 + 0.1
188,982 + 2.0
189,583 - 8448 mRNA_80 0.15 1.8
190,197 - 8448 mRNA_80 0.40 -0.5
190,496 + 8448 mRNA_80 0.53 -1.4
190,892 + 8448 mRNA_80 0.69 1.5
191,038 - 8448 mRNA_80 0.75 -0.0
191,240 - 8448 mRNA_80 0.83 0.5
191,348 + 8448 mRNA_80 0.88 0.2
191,501 + 0.6
191,522 + 1.3
191,690 + 0.3
191,721 + 0.0
191,810 + 0.9
192,102 + 1.7
192,128 + -1.9
192,564 - 8449 mRNA_81 0.27 3.3
192,571 + 8449 mRNA_81 0.27 2.1