Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_60

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_59: 8427 - Hypothetical Protein, at 141223 to 142116 8427 mRNA_60: 8428 - Hypothetical Protein, at 142423 to 142761 8428 mRNA_61: 8429 - SUPERFAMILY--SSF52047, at 143371 to 144965 8429

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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141,449 - 8427 mRNA_59 0.25 0.6
141,460 - 8427 mRNA_59 0.27 -0.1
141,509 - 8427 mRNA_59 0.32 -0.6
141,518 - 8427 mRNA_59 0.33 0.6
141,747 + 8427 mRNA_59 0.59 1.1
141,774 + 8427 mRNA_59 0.62 0.8
141,788 - 8427 mRNA_59 0.63 0.8
141,818 - 8427 mRNA_59 0.67 0.2
141,824 - 8427 mRNA_59 0.67 0.4
141,907 - 8427 mRNA_59 0.77 0.7
142,085 + -1.1
142,688 - 8428 mRNA_60 0.78 1.0
142,706 + 8428 mRNA_60 0.83 0.7
143,007 + -0.2
143,119 + -0.9
143,119 - 0.1
143,397 - -1.0
143,399 - 1.6
143,401 + 1.9
143,408 - 0.5
143,426 + -1.0
143,559 + 8429 mRNA_61 0.12 1.0