Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_59

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_58: 8426 - HMMPfam-Arrestin (or S-antigen), N-terminal domain-PF00339,SUPERFAMILY--SSF81296, at 138676 to 140962 8426 mRNA_59: 8427 - Hypothetical Protein, at 141223 to 142116 8427 mRNA_60: 8428 - Hypothetical Protein, at 142423 to 142761 8428

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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140,276 - 8426 mRNA_58 0.70 -0.9
140,436 - 8426 mRNA_58 0.77 -1.4
140,440 + 8426 mRNA_58 0.77 1.0
140,545 - 8426 mRNA_58 0.82 1.6
140,593 - 8426 mRNA_58 0.84 0.8
140,696 - 8426 mRNA_58 0.88 0.9
140,902 + 0.6
141,132 - -0.3
141,177 - 0.4
141,196 + 1.8
141,449 - 8427 mRNA_59 0.25 0.6
141,460 - 8427 mRNA_59 0.27 -0.1
141,509 - 8427 mRNA_59 0.32 -0.6
141,518 - 8427 mRNA_59 0.33 0.6
141,747 + 8427 mRNA_59 0.59 1.1
141,774 + 8427 mRNA_59 0.62 0.8
141,788 - 8427 mRNA_59 0.63 0.8
141,818 - 8427 mRNA_59 0.67 0.2
141,824 - 8427 mRNA_59 0.67 0.4
141,907 - 8427 mRNA_59 0.77 0.7
142,085 + -1.1
142,688 - 8428 mRNA_60 0.78 1.0
142,706 + 8428 mRNA_60 0.83 0.7
143,007 + -0.2