Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_52

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_51: 8419 - K10392 KIF1 kinesin family member 1, at 120072 to 126065 8419 mRNA_52: 8420 - Hypothetical Protein, at 126119 to 126700 8420 mRNA_53: 8421 - K03014 RPB6, POLR2F DNA-directed RNA polymerases I, II, and III subunit RPABC2, at 126911 to 127593 8421

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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125,121 - 8419 mRNA_51 0.84 -0.8
125,156 - 8419 mRNA_51 0.85 -1.1
125,162 + 8419 mRNA_51 0.85 0.4
125,328 + 8419 mRNA_51 0.88 1.1
125,450 - 8419 mRNA_51 0.90 -0.0
125,563 - -1.9
125,964 + 0.3
126,009 - 1.5
126,011 + -0.1
126,151 + 0.6
126,158 + 0.1
126,297 + 8420 mRNA_52 0.31 1.1
126,298 - 8420 mRNA_52 0.31 -1.9
126,314 + 8420 mRNA_52 0.34 0.6
126,324 + 8420 mRNA_52 0.35 1.5
126,324 + 8420 mRNA_52 0.35 0.3
126,425 - 8420 mRNA_52 0.53 2.3
126,428 - 8420 mRNA_52 0.53 -2.8
126,430 - 8420 mRNA_52 0.53 1.2
126,437 - 8420 mRNA_52 0.55 0.3
126,448 + 8420 mRNA_52 0.57 -0.4
126,452 + 8420 mRNA_52 0.57 -0.1
127,637 + 2.6