Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_21

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_20: 8388 - KOG0519 Sensory transduction histidine kinase, at 55031 to 59299 8388 mRNA_21: 8389 - SUPERFAMILY--SSF51045, at 59520 to 60624 8389 mRNA_22: 8390 - SUPERFAMILY--SSF51045, at 61179 to 62127 8390

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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58,621 + 8388 mRNA_20 0.84 1.9
58,761 + 8388 mRNA_20 0.87 3.5
58,774 + 8388 mRNA_20 0.88 -1.3
58,781 - 8388 mRNA_20 0.88 -1.5
58,897 + -0.7
59,466 + -0.1
59,533 - 0.2
59,766 - 8389 mRNA_21 0.22 2.7
60,085 + 8389 mRNA_21 0.51 1.5
60,661 - -0.4
60,678 - 1.1
60,688 - 2.4
61,142 - 1.7
61,523 - 8390 mRNA_22 0.36 -0.5