Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_16

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_15: 8383 - K02321 POLA2 DNA polymerase alpha subunit B, at 39313 to 41292 8383 mRNA_16: 8384 - K03407 cheA two-component system, chemotaxis family, sensor kinase CheA, at 41535 to 45882 8384

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
41,523 - 1.0
41,618 - -2.8
41,620 + -0.1
41,697 - 1.0
41,830 + 2.0
41,854 - 3.7
41,863 + 0.7
42,189 + 8384 mRNA_16 0.15 2.2
42,340 - 8384 mRNA_16 0.19 -0.1
42,375 - 8384 mRNA_16 0.19 -0.3
42,431 + 8384 mRNA_16 0.21 -0.5
42,449 + 8384 mRNA_16 0.21 -0.9
42,479 + 8384 mRNA_16 0.22 0.1
42,598 - 8384 mRNA_16 0.24 -0.9
42,602 - 8384 mRNA_16 0.25 2.4
42,604 - 8384 mRNA_16 0.25 -0.9
42,613 - 8384 mRNA_16 0.25 1.2
42,660 + 8384 mRNA_16 0.26 0.3
42,785 + 8384 mRNA_16 0.29 2.8
42,829 + 8384 mRNA_16 0.30 -0.3
42,912 + 8384 mRNA_16 0.32 0.9
42,916 - 8384 mRNA_16 0.32 0.8
43,043 + 8384 mRNA_16 0.35 0.1
43,046 - 8384 mRNA_16 0.35 1.8
43,055 + 8384 mRNA_16 0.35 3.4
43,082 + 8384 mRNA_16 0.36 1.7
43,091 + 8384 mRNA_16 0.36 1.3
43,459 - 8384 mRNA_16 0.44 0.7
43,464 - 8384 mRNA_16 0.44 1.4
43,776 - 8384 mRNA_16 0.52 -1.6
43,803 - 8384 mRNA_16 0.52 -0.0
43,804 + 8384 mRNA_16 0.52 1.3
43,804 - 8384 mRNA_16 0.52 -0.1
43,815 + 8384 mRNA_16 0.52 1.3
43,816 + 8384 mRNA_16 0.52 0.1
43,816 + 8384 mRNA_16 0.52 0.4
43,882 + 8384 mRNA_16 0.54 -2.1
43,929 + 8384 mRNA_16 0.55 -1.0
43,929 + 8384 mRNA_16 0.55 0.7
43,937 + 8384 mRNA_16 0.55 0.1
43,954 - 8384 mRNA_16 0.56 -0.9
43,960 + 8384 mRNA_16 0.56 -0.2
43,962 + 8384 mRNA_16 0.56 0.9
43,963 + 8384 mRNA_16 0.56 2.0
43,986 + 8384 mRNA_16 0.56 0.9
44,066 - 8384 mRNA_16 0.58 -0.1
44,142 - 8384 mRNA_16 0.60 0.2
44,197 + 8384 mRNA_16 0.61 0.5
44,332 - 8384 mRNA_16 0.64 0.4
44,390 - 8384 mRNA_16 0.66 -2.0
44,476 - 8384 mRNA_16 0.68 -0.3
44,522 + 8384 mRNA_16 0.69 0.2
44,543 + 8384 mRNA_16 0.69 -2.2
44,633 + 8384 mRNA_16 0.71 -1.3
44,699 - 8384 mRNA_16 0.73 1.6
44,712 + 8384 mRNA_16 0.73 0.5
44,812 - 8384 mRNA_16 0.75 -0.5
44,826 - 8384 mRNA_16 0.76 0.7
44,979 + 8384 mRNA_16 0.79 -0.9
44,979 + 8384 mRNA_16 0.79 0.9
45,062 - 8384 mRNA_16 0.81 -0.2
45,113 + 8384 mRNA_16 0.82 0.9
45,142 - 8384 mRNA_16 0.83 -0.7
45,678 + -1.8
45,713 + -1.6
45,813 + 1.0
45,822 - -1.0
45,833 - 1.5
45,845 - 1.0
45,967 - -0.8
45,981 + 0.2
45,990 - -0.4
45,992 + 2.1
45,994 - 0.2
45,995 + 0.4
45,999 + 1.1
46,003 + 2.5
46,023 + 0.7
46,027 + -0.3
46,040 + -0.8
46,040 + 0.7
46,054 - 0.8
46,101 - 2.1
46,213 - 1.9
46,221 - -0.3
46,254 + -1.7
46,266 + 4.0
46,352 + 1.0
46,354 + 1.4
46,357 + -1.6
46,384 + 0.7
46,416 + 1.0
46,425 - 0.9
46,482 - 0.2
46,527 - 0.3
46,645 - 3.2
46,812 - 0.0
46,851 + 1.6