Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1: 8369 - K12198 CHMP5, VPS60 charged multivesicular body protein 5, at 1571 to 2453 8369 mRNA_2: 8370 - PRINTS-Proline rich extensin signature-PR01217, at 3233 to 7809 8370 mRNA_3: 8371 - K15161 CCNC, SSN8 cyclin C, at 8155 to 10023 8371

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
2,268 + 8369 mRNA_1 0.79 -0.6
2,361 - 8369 mRNA_1 0.89 -1.3
2,441 + 0.4
2,550 + 1.0
2,552 - 0.2
2,564 + -0.5
2,701 + 2.4
2,839 - 1.9
2,853 + -0.6
2,946 - 1.7
3,005 - 0.7
3,125 - -0.4
3,136 + -1.0
5,042 - 8370 mRNA_2 0.40 0.2
5,788 - 8370 mRNA_2 0.56 0.1
7,143 + 8370 mRNA_2 0.85 -0.5
7,817 - 0.9
7,865 + 2.2
7,991 + 0.3
8,148 - 2.3
8,150 - 1.4
8,205 - 0.7
8,285 + 0.1
8,396 + 8371 mRNA_3 0.13 -0.2
8,694 - 8371 mRNA_3 0.29 0.8
8,707 + 8371 mRNA_3 0.30 -0.2