Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8480

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8479: 16847 - Hypothetical Protein, at 1322853 to 1323925 16847 mRNA_8480: 16848 - KOG2174 Leptin receptor gene-related protein, at 1324303 to 1324895 16848 mRNA_8481: 16849 - Hypothetical Protein, at 1325084 to 1327878 16849

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,323,379 - 16847 mRNA_8479 0.49 0.5
1,323,379 - 16847 mRNA_8479 0.49 1.9
1,323,541 + 16847 mRNA_8479 0.64 0.4
1,323,712 + 16847 mRNA_8479 0.80 1.9
1,323,731 - 16847 mRNA_8479 0.82 -1.0
1,323,989 + -0.4
1,324,037 - 2.0
1,324,115 - 0.7
1,324,254 - 2.0
1,324,264 - -0.4
1,324,281 - 1.4
1,324,304 + 0.1
1,324,316 + 0.7
1,324,599 - 16848 mRNA_8480 0.50 1.6
1,324,718 - 16848 mRNA_8480 0.70 -1.4
1,324,733 - 16848 mRNA_8480 0.73 -1.2
1,324,863 + 0.2
1,325,010 + 0.1
1,325,023 + 0.3
1,325,048 + 0.7
1,325,052 - -1.1
1,325,142 + 0.5
1,325,168 - 0.2
1,325,624 - 16849 mRNA_8481 0.19 1.8
1,325,633 - 16849 mRNA_8481 0.20 -0.4
1,325,756 - 16849 mRNA_8481 0.24 -0.3
1,325,759 + 16849 mRNA_8481 0.24 1.1
1,325,841 - 16849 mRNA_8481 0.27 0.1
1,325,842 - 16849 mRNA_8481 0.27 -0.3