Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8468

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8467: 16835 - Hypothetical Protein, at 1303609 to 1304454 16835 mRNA_8468: 16836 - K00131 gapN glyceraldehyde-3-phosphate dehydrogenase (NADP+), at 1304768 to 1306783 16836 mRNA_8469: 16837 - K14654 RIB7, arfC 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase, at 1306981 to 1308021 16837

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,303,781 - 16835 mRNA_8467 0.20 0.5
1,303,953 - 16835 mRNA_8467 0.41 0.1
1,304,109 - 16835 mRNA_8467 0.59 0.7
1,304,594 - -1.4
1,304,607 + 0.0
1,304,723 + 0.8
1,304,808 - -0.5
1,304,824 + 2.3
1,304,954 - 1.1
1,305,222 - 16836 mRNA_8468 0.23 -0.9
1,305,276 + 16836 mRNA_8468 0.25 -0.4
1,305,435 - 16836 mRNA_8468 0.33 1.1
1,305,545 + 16836 mRNA_8468 0.39 1.6
1,305,729 + 16836 mRNA_8468 0.48 0.1
1,305,815 - 16836 mRNA_8468 0.52 0.6
1,305,985 + 16836 mRNA_8468 0.60 0.1
1,306,022 - 16836 mRNA_8468 0.62 1.1
1,306,023 + 16836 mRNA_8468 0.62 -0.7
1,306,150 + 16836 mRNA_8468 0.69 -0.9
1,306,429 - 16836 mRNA_8468 0.82 0.5
1,306,884 - 0.7
1,306,891 + -0.0
1,306,917 + 0.7