Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8440

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8439: 16807 - KOG4162 Predicted calmodulin-binding protein, at 1231325 to 1234854 16807 mRNA_8440: 16808 - Hypothetical Protein, at 1234989 to 1235656 16808 mRNA_8441: 16809 - K09274 K09274 HMG box factor, other, at 1236360 to 1239302 16809

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,234,932 - -2.0
1,234,951 + -0.3
1,234,957 - -1.3
1,235,566 + 16808 mRNA_8440 0.86 -1.8
1,235,671 - 0.4
1,235,696 + 0.2
1,235,867 - -0.4
1,236,129 + -0.8
1,236,276 + -0.7
1,236,294 + 0.7
1,236,309 + -1.5
1,236,343 + 2.4
1,236,605 + -0.2