Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8413

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8412: 16780 - KOG2504 Monocarboxylate transporter, at 1160718 to 1162780 16780 mRNA_8413: 16781 - KOG4484 Uncharacterized conserved protein, at 1162825 to 1164107 16781 mRNA_8414: 16782 - Hypothetical Protein, at 1164242 to 1165926 16782

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,161,827 + 16780 mRNA_8412 0.54 1.6
1,161,827 + 16780 mRNA_8412 0.54 -0.1
1,161,827 + 16780 mRNA_8412 0.54 0.1
1,161,827 + 16780 mRNA_8412 0.54 0.7
1,161,858 + 16780 mRNA_8412 0.55 0.7
1,161,972 - 16780 mRNA_8412 0.61 -0.4
1,162,143 + 16780 mRNA_8412 0.69 -0.6
1,162,281 + 16780 mRNA_8412 0.76 2.9
1,162,314 - 16780 mRNA_8412 0.77 -1.3
1,162,385 + 16780 mRNA_8412 0.81 0.6
1,162,385 - 16780 mRNA_8412 0.81 -1.0
1,162,563 - 16780 mRNA_8412 0.89 -0.2
1,162,666 - -0.7
1,162,713 - -1.0
1,162,714 + 0.9
1,162,739 + -0.8
1,162,880 + 0.0
1,162,954 + 16781 mRNA_8413 0.10 0.3
1,163,723 - 16781 mRNA_8413 0.70 -1.6
1,163,729 + 16781 mRNA_8413 0.70 -2.0
1,163,785 + 16781 mRNA_8413 0.75 -0.9
1,163,883 - 16781 mRNA_8413 0.82 1.1
1,164,158 + 0.7
1,164,175 - 1.8
1,164,183 + -0.6