Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8404

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8403: 16771 - K08829 MAK male germ cell-associated kinase, at 1134667 to 1138585 16771 mRNA_8404: 16772 - Hypothetical Protein, at 1139577 to 1141043 16772 mRNA_8405: 16773 - K11341 YEATS4, GAS41, YAF9 YEATS domain-containing protein 4, at 1141233 to 1142255 16773

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,138,685 - -0.4
1,138,696 + -0.1
1,138,828 + -1.0
1,138,831 + -0.6
1,138,969 - -1.8
1,138,977 + 2.2
1,138,978 + 1.3
1,138,984 + 0.6
1,138,990 - 1.7
1,139,005 - 0.8
1,139,012 + 1.2
1,139,023 + 1.4
1,139,107 + -0.4
1,139,129 + -0.9
1,139,219 + 2.6
1,139,253 + 0.7
1,139,268 - -0.1
1,139,277 + 0.2
1,139,316 - -1.1
1,139,324 - 0.2
1,139,388 - 0.0
1,139,413 - 0.3
1,139,431 - 0.7
1,139,458 + 3.5
1,139,471 + 0.7
1,139,474 + 1.8
1,139,510 + 1.1
1,139,533 + 1.4
1,139,681 + -0.2
1,139,823 + 16772 mRNA_8404 0.17 3.2
1,140,529 + 16772 mRNA_8404 0.65 1.5
1,140,928 + -2.2
1,141,094 - 0.9
1,141,111 + 1.8