Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8377

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8376: 16744 - Hypothetical Protein, at 1065771 to 1066578 16744 mRNA_8377: 16745 - HMMPfam-Fungal specific transcription factor domain-PF04082, at 1066726 to 1069498 16745 mRNA_8378: 16746 - KOG0756 Mitochondrial tricarboxylate/dicarboxylate carrier proteins, at 1070440 to 1071948 16746

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,065,742 + -1.6
1,065,784 - 2.4
1,065,795 - 0.2
1,066,372 + 16744 mRNA_8376 0.74 -0.6
1,066,661 + 0.3
1,066,676 - 0.8
1,066,792 + 2.0
1,066,953 - 1.3
1,067,225 + 16745 mRNA_8377 0.18 1.0
1,067,355 - 16745 mRNA_8377 0.23 -0.9
1,067,695 - 16745 mRNA_8377 0.35 0.1
1,068,726 + 16745 mRNA_8377 0.72 -0.7
1,068,938 + 16745 mRNA_8377 0.80 0.3
1,069,505 + 0.3
1,069,887 + -1.4
1,070,004 + -2.7
1,070,043 + 1.1
1,070,179 + 0.6
1,070,190 - 0.1
1,070,193 + 0.7
1,070,203 - 0.5
1,070,223 + 1.3
1,070,333 - -0.5
1,070,346 - -0.4