Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8371

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8370: 16738 - K12525 metL bifunctional aspartokinase / homoserine dehydrogenase 2, at 1054489 to 1055817 16738 mRNA_8371: 16739 - HMMPfam-GPR1/FUN34/yaaH family-PF01184, at 1055987 to 1057436 16739 mRNA_8372: 16740 - KOG1729 FYVE finger containing protein, at 1057653 to 1060208 16740

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,055,139 - 16738 mRNA_8370 0.49 0.1
1,055,205 + 16738 mRNA_8370 0.54 -0.8
1,055,485 + 16738 mRNA_8370 0.75 -0.3
1,056,813 - 16739 mRNA_8371 0.57 2.6
1,057,522 - -0.0
1,057,544 + -0.6
1,057,545 - -0.2
1,057,586 - -0.1
1,057,586 - 0.0
1,057,665 - 0.2
1,057,671 + 0.1
1,057,718 + 0.1
1,057,729 - 1.1
1,057,738 - -0.4
1,057,742 + 1.1
1,057,953 + 16740 mRNA_8372 0.12 -0.9
1,058,219 + 16740 mRNA_8372 0.22 -0.3
1,058,360 + 16740 mRNA_8372 0.28 0.5