Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8363

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8362: 16730 - Hypothetical Protein, at 1039289 to 1041924 16730 mRNA_8363: 16731 - KOG1693 emp24/gp25L/p24 family of membrane trafficking proteins, at 1042478 to 1043371 16731 mRNA_8364: 16732 - K01488 add, ADA adenosine deaminase, at 1043494 to 1044920 16732

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,041,951 + 1.2
1,041,954 - -0.6
1,041,977 + -1.4
1,041,987 - 1.2
1,041,993 + 0.0
1,042,007 - -0.5
1,042,102 - 0.6
1,042,152 + 0.7
1,042,153 + 0.5
1,042,261 - 0.4
1,042,287 + 0.9
1,042,433 - 0.1
1,042,563 - 0.8
1,042,579 + 16731 mRNA_8363 0.11 1.1
1,042,583 - 16731 mRNA_8363 0.12 0.7
1,042,708 - 16731 mRNA_8363 0.26 1.2
1,042,733 + 16731 mRNA_8363 0.29 3.5
1,042,882 + 16731 mRNA_8363 0.45 2.6
1,042,962 + 16731 mRNA_8363 0.54 0.9
1,043,124 + 16731 mRNA_8363 0.72 2.5
1,043,719 + 16732 mRNA_8364 0.16 0.0
1,044,110 - 16732 mRNA_8364 0.43 1.6
1,044,155 - 16732 mRNA_8364 0.46 0.6
1,044,253 - 16732 mRNA_8364 0.53 -0.3