Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8351

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8350: 16718 - K11397 EAF1, VID21 chromatin modification-related protein VID21, at 1003581 to 1006700 16718 mRNA_8351: 16719 - K14303 NUP160, NUP120 nuclear pore complex protein Nup160, at 1006818 to 1012012 16719 mRNA_8352: 16720 - Hypothetical Protein, at 1012980 to 1013679 16720

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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1,005,949 + 16718 mRNA_8350 0.76 -2.4
1,006,501 - 1.0
1,006,963 - 1.8
1,007,264 - 1.2
1,009,044 + 16719 mRNA_8351 0.43 -0.8
1,011,993 + 0.6
1,011,998 - 4.2
1,012,004 + 0.5
1,012,274 + 0.4
1,012,614 - 0.2
1,012,872 - 0.0
1,012,893 - -0.4