Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8308

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8307: 16675 - Hypothetical Protein, at 897879 to 899223 16675 mRNA_8308: 16676 - ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 899547 to 900613 16676 mRNA_8309: 16677 - K06965 PELO, DOM34, pelA protein pelota, at 900721 to 902755 16677

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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898,676 - 16675 mRNA_8307 0.59 0.8
898,725 + 16675 mRNA_8307 0.63 0.7
898,998 - 16675 mRNA_8307 0.83 -1.8
899,331 - -1.4
899,349 + -0.7
899,458 + 1.1
899,584 - 0.9
899,812 + 16676 mRNA_8308 0.25 0.4
899,887 - 16676 mRNA_8308 0.32 -2.6
900,053 - 16676 mRNA_8308 0.47 0.1
900,061 + 16676 mRNA_8308 0.48 -0.2
900,062 - 16676 mRNA_8308 0.48 0.7
900,197 - 16676 mRNA_8308 0.61 -0.3
900,335 - 16676 mRNA_8308 0.74 -0.1
900,340 + 16676 mRNA_8308 0.74 1.5
900,489 + 16676 mRNA_8308 0.88 1.8