Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8295

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8294: 16662 - Hypothetical Protein, at 869009 to 869206 16662 mRNA_8295: 16663 - Hypothetical Protein, at 869651 to 870841 16663 mRNA_8296: 16664 - K19951 TBC1D8_9 TBC1 domain family member 8/9, at 871259 to 875299 16664

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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868,662 + 2.1
868,687 - 0.9
868,711 - 1.4
868,840 - 0.6
868,972 + 0.2
869,045 + 16662 mRNA_8294 0.18 0.3
869,061 - 16662 mRNA_8294 0.26 0.6
869,117 - 16662 mRNA_8294 0.55 -0.1
869,127 + 16662 mRNA_8294 0.60 -0.1
869,166 + 16662 mRNA_8294 0.79 0.1
869,175 - 16662 mRNA_8294 0.84 0.4
869,178 + 16662 mRNA_8294 0.85 1.2
869,195 + -0.3
869,218 - 0.6
869,233 + -0.3
869,261 + -0.2
869,262 - 0.2
869,270 + 0.6
869,273 - 2.0
869,273 - -1.8
869,276 - 1.7
869,278 - -0.6
869,288 + 1.9
869,290 + -0.4
869,292 - 2.2
869,302 + 1.4
869,303 + -1.3
869,345 - 1.8
869,359 - 1.2
869,371 + -0.1
869,383 - 0.6
869,396 - 0.0
869,407 + -0.1
869,409 - 1.7
869,425 + 0.7
869,559 - 1.2
869,876 + 16663 mRNA_8295 0.19 -0.4
870,153 - 16663 mRNA_8295 0.42 2.2
870,579 - 16663 mRNA_8295 0.78 0.8
870,601 + 16663 mRNA_8295 0.80 0.1
870,606 - 16663 mRNA_8295 0.80 0.7
871,016 - 0.3
871,200 - 1.6
871,201 - 3.5
871,209 - 3.0
871,354 + 0.7
871,682 + 16664 mRNA_8296 0.10 -1.3