Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8279

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8278: 16646 - K16330 K16330 pseudouridylate synthase / pseudouridine kinase, at 825362 to 828181 16646 mRNA_8279: 16647 - BLAST Type-1 angiotensin II receptor-associated protein [Ch..., at 829000 to 829923 16647 mRNA_8280: 16648 - KOG2157 Predicted tubulin-tyrosine ligase, at 830220 to 831668 16648

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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828,247 - 0.2
828,405 + -0.8
828,668 + 0.2
828,801 - -0.4
828,812 + 0.4
828,820 - 3.2
828,839 + 1.5
828,843 + -1.4
828,845 + 0.2
828,848 - -1.2
828,983 - -0.3
828,984 + -1.0
828,986 - -1.8
828,994 - 1.6
828,999 + -0.2
829,001 + 0.7
829,005 - -0.2
829,695 - 16647 mRNA_8279 0.75 2.2
829,699 + 16647 mRNA_8279 0.76 -1.8
829,699 + 16647 mRNA_8279 0.76 -1.7
829,717 + 16647 mRNA_8279 0.78 0.4
829,992 + 0.8
829,999 - -0.2
830,012 + 0.1
830,135 - 0.2
830,283 + -1.6
830,307 + 0.1
830,456 + 16648 mRNA_8280 0.16 2.9