Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8265

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8264: 16632 - KOG4754 Predicted phosphoglycerate mutase, at 800850 to 802295 16632 mRNA_8265: 16633 - KOG0444 Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats), at 802560 to 804214 16633 mRNA_8266: 16634 - K07297 ADIPOR adiponectin receptor, at 804995 to 806356 16634

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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801,639 + 16632 mRNA_8264 0.55 -1.0
801,816 - 16632 mRNA_8264 0.67 -0.6
801,937 - 16632 mRNA_8264 0.75 -0.6
802,096 - 16632 mRNA_8264 0.86 -0.1
802,262 + -1.1
802,392 + 2.1
802,528 + -0.1
802,826 + 16633 mRNA_8265 0.16 0.9
802,987 + 16633 mRNA_8265 0.26 0.0
803,518 + 16633 mRNA_8265 0.58 0.3
803,690 + 16633 mRNA_8265 0.68 2.6
803,797 + 16633 mRNA_8265 0.75 0.0
803,804 - 16633 mRNA_8265 0.75 0.6
803,812 + 16633 mRNA_8265 0.76 -1.2
803,812 + 16633 mRNA_8265 0.76 -0.7
803,817 - 16633 mRNA_8265 0.76 -0.4
803,833 + 16633 mRNA_8265 0.77 -0.1
803,864 - 16633 mRNA_8265 0.79 0.5
803,873 + 16633 mRNA_8265 0.79 -0.0
803,933 - 16633 mRNA_8265 0.83 -0.3
803,968 + 16633 mRNA_8265 0.85 -0.9
803,968 + 16633 mRNA_8265 0.85 -0.5
803,986 - 16633 mRNA_8265 0.86 0.0
804,098 + -1.0
804,109 - 0.3
804,115 + 0.5
804,158 - 0.5
804,158 - 0.1
804,159 + 0.2
804,161 + 0.9
804,161 + -1.1
804,167 - -0.2
804,173 + -0.5
804,179 - 0.0
804,185 - 0.1
804,188 - 2.3
804,192 + 0.3
804,211 - -0.2
804,216 + -0.1
804,221 - -1.4
804,231 - 0.3
804,235 + -0.3
804,244 - -0.1
804,318 + -0.9
804,322 + 0.8
804,323 + -0.9
804,330 + 0.1
804,338 - 0.7
804,455 - 0.2
804,494 + 0.8
804,613 + 1.0
804,634 - 1.0
804,640 - 1.6
804,645 + 0.9
804,658 - 0.5
804,660 - 0.0
804,674 - -2.3
804,701 - -0.0
804,845 - 1.1
804,870 + -0.6
804,891 - -0.1
804,923 - 0.8
805,029 + 1.8
805,068 + 0.7