Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8255

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8254: 16622 - HMMPfam-Stc1 domain-PF12898, at 776228 to 777333 16622 mRNA_8255: 16623 - K01792 E5.1.3.15 glucose-6-phosphate 1-epimerase, at 777687 to 778914 16623 mRNA_8256: 16624 - K11324 DMAP1, SWC4, EAF2 DNA methyltransferase 1-associated protein 1, at 779592 to 781358 16624

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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776,801 + 16622 mRNA_8254 0.52 1.2
777,072 + 16622 mRNA_8254 0.76 0.1
777,189 + 16622 mRNA_8254 0.87 -0.2
777,630 + 0.3
778,356 + 16623 mRNA_8255 0.54 -1.0
778,362 + 16623 mRNA_8255 0.55 -2.9
778,550 + 16623 mRNA_8255 0.70 0.4
778,821 + -1.5
778,836 - 0.5
778,937 - 0.3
778,949 + -0.0
778,963 - 0.7
778,963 - 0.4
778,972 + 0.0
778,975 + 1.0
779,008 + -0.2
779,123 - 1.7
779,139 + -2.1
779,256 - 1.0
779,409 - 0.3