Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8254

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8253: 16621 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 774552 to 775844 16621 mRNA_8254: 16622 - HMMPfam-Stc1 domain-PF12898, at 776228 to 777333 16622 mRNA_8255: 16623 - K01792 E5.1.3.15 glucose-6-phosphate 1-epimerase, at 777687 to 778914 16623

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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775,340 + 16621 mRNA_8253 0.61 0.5
775,470 - 16621 mRNA_8253 0.71 0.1
775,474 + 16621 mRNA_8253 0.71 0.3
775,606 + 16621 mRNA_8253 0.82 0.9
775,906 - -1.0
775,923 + 0.6
775,938 + -1.1
776,030 + -0.0
776,087 - -1.2
776,092 + -1.6
776,226 + 0.3
776,625 - 16622 mRNA_8254 0.36 0.2
776,801 + 16622 mRNA_8254 0.52 1.2
777,072 + 16622 mRNA_8254 0.76 0.1
777,189 + 16622 mRNA_8254 0.87 -0.2
777,630 + 0.3