Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8237

Experiments: YPD

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8236: 16604 - Interpro Fungal protein of unknown function (DUF1770) 0, at 733012 to 733833 16604 mRNA_8237: 16605 - K04345 PKA protein kinase A, at 734227 to 736264 16605 mRNA_8238: 16606 - KOG2551 Phospholipase/carboxyhydrolase, at 736874 to 737919 16606

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YPD
remove
733,232 - 16604 mRNA_8236 0.27 0.4
733,239 - 16604 mRNA_8236 0.28 0.4
733,659 - 16604 mRNA_8236 0.79 1.8
733,685 - 16604 mRNA_8236 0.82 0.9
733,692 - 16604 mRNA_8236 0.83 2.4
733,692 - 16604 mRNA_8236 0.83 -0.1
733,701 + 16604 mRNA_8236 0.84 1.6
733,725 - 16604 mRNA_8236 0.87 0.1
733,835 + 0.9
733,837 + -0.4
734,250 + -1.9
734,251 - 2.7
734,272 + 1.3
734,426 + 1.7
734,459 + 16605 mRNA_8237 0.11 -0.6
734,581 + 16605 mRNA_8237 0.17 1.0
734,656 - 16605 mRNA_8237 0.21 -2.6
734,679 + 16605 mRNA_8237 0.22 0.0
734,986 + 16605 mRNA_8237 0.37 0.4
735,132 - 16605 mRNA_8237 0.44 0.0
735,566 + 16605 mRNA_8237 0.66 -0.0
735,704 + 16605 mRNA_8237 0.72 0.3
735,822 + 16605 mRNA_8237 0.78 -1.3
735,983 - 16605 mRNA_8237 0.86 1.8
736,010 - 16605 mRNA_8237 0.87 -1.2
736,011 + 16605 mRNA_8237 0.88 1.9
736,019 + 16605 mRNA_8237 0.88 0.8
736,025 + 16605 mRNA_8237 0.88 0.3
736,137 - 0.6
736,148 + 0.6
736,169 + 0.7
736,172 - 1.7
736,224 - 0.0
736,309 - 2.2
736,315 + -1.0
736,324 - 1.6
736,329 + 0.5
736,329 - 0.2
736,334 - 3.0
736,350 - -2.9
736,351 + 0.4
736,457 + 2.0
736,479 - -0.5
736,487 - 1.6
736,488 - 1.6
736,488 + 2.1
736,490 - -0.4
736,498 + 1.9
736,500 - 0.0
736,501 - -0.3
736,501 + -2.2
736,502 + 0.6
736,502 + -0.1
736,502 + 0.1
736,503 + 2.6
736,504 - 0.5
736,505 + -0.7
736,505 - -0.0
736,506 - -1.6
736,508 + 0.4
736,510 + -0.2
736,511 - -0.1
736,511 - 0.2
736,544 - 0.0
736,545 + 0.5
736,546 - 0.1
736,566 + 0.4
736,581 + 1.2
736,663 - 0.2
736,675 + -0.1
736,686 + 0.2
736,714 - 0.9
736,714 + 0.4
736,725 - 1.6
736,731 - -0.5
736,745 + 0.1
736,857 - -0.5
736,863 + 0.3
736,866 - 1.4
736,881 + -0.4
737,003 - 16606 mRNA_8238 0.12 -0.5
737,004 - 16606 mRNA_8238 0.12 -0.5
737,005 + 16606 mRNA_8238 0.13 -1.4
737,012 - 16606 mRNA_8238 0.13 -0.3
737,036 - 16606 mRNA_8238 0.15 -0.2