Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8219

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8218: 16586 - K02905 RP-L29e, RPL29 large subunit ribosomal protein L29e, at 697887 to 698253 16586 mRNA_8219: 16587 - K15202 GTF3C5, TFC1 general transcription factor 3C polypeptide 5 (transcription factor C subunit 1), at 698551 to 700808 16587 mRNA_8220: 16588 - KOG3894 SNARE protein Syntaxin 18/UFE1, at 701037 to 702340 16588

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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697,783 + -1.1
698,266 + -1.3
698,853 - 16587 mRNA_8219 0.13 3.0
698,977 - 16587 mRNA_8219 0.19 1.5
699,080 + 16587 mRNA_8219 0.23 1.5
699,270 + 16587 mRNA_8219 0.32 2.6