Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8205

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8204: 16572 - KOG3289 Uncharacterized conserved protein encoded by sequence overlapping the COX4 gene, at 666079 to 666849 16572 mRNA_8205: 16573 - K11339 MORF4L1, MRG15, EAF3 mortality factor 4-like protein 1, at 667088 to 668435 16573 mRNA_8206: 16574 - Hypothetical Protein, at 668927 to 671971 16574

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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666,309 - 16572 mRNA_8204 0.30 1.3
666,314 - 16572 mRNA_8204 0.30 1.3
666,901 - -0.1
667,055 - 0.0
667,909 + 16573 mRNA_8205 0.61 -1.4
668,207 + 16573 mRNA_8205 0.83 -0.5
668,511 + 0.8
668,655 + 0.5
668,663 + -0.5
668,672 - 0.4
668,673 - 2.9
668,678 - 1.2
668,684 - 0.6
668,805 - -0.4
669,249 + 16574 mRNA_8206 0.11 0.0
669,258 - 16574 mRNA_8206 0.11 -0.7