Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8197

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8197: 16565 - KOG2922 Uncharacterized conserved protein, at 652238 to 654491 16565 mRNA_8198: 16566 - K03190 ureD, ureH urease accessory protein, at 654718 to 655775 16566

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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651,355 - -0.4
651,363 - 0.5
651,367 + -2.6
651,378 - 0.3
651,390 + 0.5
651,517 + -0.5
651,532 - 0.1
651,930 - 0.4
651,945 + -0.9
651,950 + -1.6
652,078 - 2.3
652,378 - -0.3
652,381 + -3.0
652,389 - -0.6
652,398 + 0.2
652,507 - 16565 mRNA_8197 0.12 1.5
652,673 - 16565 mRNA_8197 0.19 0.6
652,676 + 16565 mRNA_8197 0.19 2.4
652,680 - 16565 mRNA_8197 0.20 0.3
653,099 + 16565 mRNA_8197 0.38 -0.8
653,158 + 16565 mRNA_8197 0.41 -1.7
653,870 + 16565 mRNA_8197 0.72 0.2
654,270 - 2.6
654,283 - 1.4
654,573 - 1.2
654,578 + 1.6
654,578 + -0.5
654,726 + 0.3
654,737 - 1.4
654,743 - -0.5
654,745 + -1.0
655,018 + 16566 mRNA_8198 0.28 1.4
655,024 - 16566 mRNA_8198 0.29 0.8
655,181 - 16566 mRNA_8198 0.44 2.6