Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8192

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8191: 16559 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 634694 to 637536 16559 mRNA_8192: 16560 - K12780 REC8 meiotic recombination protein REC8, fungi type, at 637795 to 641120 16560 mRNA_8193: 16561 - Hypothetical Protein, at 641323 to 644118 16561

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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636,850 - 16559 mRNA_8191 0.76 -1.0
637,324 + 1.0
637,456 - 1.5
638,599 + 16560 mRNA_8192 0.24 -0.1
638,748 - 16560 mRNA_8192 0.29 1.0
639,055 - 16560 mRNA_8192 0.38 2.1
639,181 - 16560 mRNA_8192 0.42 2.3
639,195 + 16560 mRNA_8192 0.42 0.0
639,893 - 16560 mRNA_8192 0.63 0.4
640,080 + 16560 mRNA_8192 0.69 -1.3
640,082 + 16560 mRNA_8192 0.69 -1.4
640,256 - 16560 mRNA_8192 0.74 -0.3
640,370 + 16560 mRNA_8192 0.77 0.6
640,388 - 16560 mRNA_8192 0.78 0.3
640,553 - 16560 mRNA_8192 0.83 0.2
640,860 - 0.3
641,129 - -0.6
641,436 + 0.2
641,584 + -0.3