Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8186

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8185: 16553 - K02359 EGH egghead protein (zeste-white 4 protein), at 618810 to 622514 16553 mRNA_8186: 16554 - Hypothetical Protein, at 622930 to 623583 16554 mRNA_8187: 16555 - K10949 KDELR ER lumen protein retaining receptor, at 624425 to 625437 16555

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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623,062 + 16554 mRNA_8186 0.20 2.7
623,357 - 16554 mRNA_8186 0.65 1.6
623,378 + 16554 mRNA_8186 0.69 3.9
623,487 + 16554 mRNA_8186 0.85 1.8
623,488 - 16554 mRNA_8186 0.85 1.1
623,496 - 16554 mRNA_8186 0.87 -0.1
623,498 - 16554 mRNA_8186 0.87 -2.6
623,498 - 16554 mRNA_8186 0.87 -0.3
623,498 - 16554 mRNA_8186 0.87 0.7
623,503 - 16554 mRNA_8186 0.88 1.8
623,528 - 2.1
623,530 + 0.4
623,540 - 0.2
623,657 + 0.0
623,669 + -0.6
623,673 - 2.1
623,675 + 1.9
623,682 + 0.7
623,682 - 0.7
623,687 + -0.2
623,689 + -0.7
623,717 + -0.4
623,807 - -0.4
623,851 - -0.7
623,853 - 0.3
623,853 - 1.6
623,857 - 0.1
623,858 + 1.6
623,858 + 1.5
623,862 + -1.1
623,867 + 1.0
623,881 + 0.9
623,954 + 1.0
623,962 - 0.5
623,975 + 1.0
623,990 + 0.6
623,992 + -1.2
623,992 - 1.3
623,998 - -0.2
624,000 - 0.1
624,004 + -0.4
624,013 + -0.2
624,016 - 0.8
624,019 + 1.7
624,025 - -0.7
624,029 - 1.4
624,160 - 0.1
624,164 + 0.8
624,165 - 1.1
624,165 - 0.9
624,170 - -0.5
624,325 + 0.8
624,327 - -0.7
624,457 + -2.2
624,463 - 0.0