Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8173

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8172: 16540 - K17592 SACS sacsin, at 590465 to 596519 16540 mRNA_8173: 16541 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 596757 to 597514 16541

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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595,787 - 16540 mRNA_8172 0.88 -0.2
595,921 - 0.1
596,404 - 1.7
596,532 + -0.1
596,941 + 16541 mRNA_8173 0.24 -0.7
597,553 + -0.3
597,555 - 1.2
597,574 + 0.2
597,705 - -0.7
597,842 - 0.7
597,852 - 0.1
597,861 + 1.7
597,869 - -0.5
597,872 + 1.4
597,900 + -0.1
597,941 + 1.2
598,203 - -0.1
598,226 - -0.8
598,345 + 0.3
598,345 + -0.8
598,345 + -2.0
598,440 + -0.4
598,452 + 1.2
598,465 - -0.8
598,471 - -0.3
598,471 - -0.5
598,481 + -0.2
598,483 + 1.1
598,493 + -1.1
598,494 - 0.7
598,498 + 0.2
598,499 + -0.1
598,501 + -0.1
598,510 - -0.1
598,514 + -1.3