Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8151

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8150: 16518 - K11135 PINX1 Pin2-interacting protein X1, at 530579 to 532165 16518 mRNA_8151: 16519 - K19846 SPA2 protein SPA2, at 532598 to 536503 16519 mRNA_8152: 16520 - KOG2944 Glyoxalase, at 536656 to 537504 16520

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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532,258 - 0.2
532,388 - 1.2
532,392 - -0.4
532,393 + 0.2
532,399 + -0.6
532,407 + -0.0
532,493 - 1.8
532,532 + 0.9
532,536 + -0.1
532,538 - 2.7
532,538 + 0.2
532,543 + 0.0
532,544 - 1.4
532,592 - -0.4
532,680 + 0.6
532,682 - 0.2
532,687 - 1.8
532,696 + 2.2
532,696 + -0.0
532,825 + 0.0
532,836 + -0.1
532,844 - -1.2
532,853 + -0.8
533,110 - 16519 mRNA_8151 0.13 1.5
533,181 - 16519 mRNA_8151 0.15 1.7
533,271 + 16519 mRNA_8151 0.17 2.5
533,392 - 16519 mRNA_8151 0.20 -0.3
533,404 + 16519 mRNA_8151 0.21 -0.4
533,572 - 16519 mRNA_8151 0.25 -0.1
533,580 + 16519 mRNA_8151 0.25 0.9
534,100 + 16519 mRNA_8151 0.38 -0.5
534,143 + 16519 mRNA_8151 0.40 -0.6
534,479 - 16519 mRNA_8151 0.48 0.2
534,542 + 16519 mRNA_8151 0.50 -0.0
534,558 - 16519 mRNA_8151 0.50 0.7
534,580 + 16519 mRNA_8151 0.51 0.4
534,631 - 16519 mRNA_8151 0.52 -0.4
535,322 - 16519 mRNA_8151 0.70 -0.6
535,452 - 16519 mRNA_8151 0.73 2.4
535,731 + 16519 mRNA_8151 0.80 3.2
535,892 - 16519 mRNA_8151 0.84 0.1
535,999 - 16519 mRNA_8151 0.87 0.7
536,164 + -1.4
536,750 + 16520 mRNA_8152 0.11 -0.3
537,125 - 16520 mRNA_8152 0.55 -0.1
537,241 - 16520 mRNA_8152 0.69 1.2
537,333 - 16520 mRNA_8152 0.80 0.1
537,361 - 16520 mRNA_8152 0.83 1.0
537,465 - 2.0
537,470 - 0.5