Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8127

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8126: 16494 - BLAST putative 15-O-acetyltransferase Tri3 [Moniliophthora ..., at 479641 to 482114 16494 mRNA_8127: 16495 - BLAST CigA protein-like protein [Phycomyces blakesleean..., at 482813 to 485416 16495 mRNA_8128: 16496 - KOG0526 Nucleosome-binding factor SPN, POB3 subunit, at 485757 to 486942 16496

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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481,947 - 1.1
482,528 - -0.4
483,400 + 16495 mRNA_8127 0.23 -0.8
483,573 - 16495 mRNA_8127 0.29 -0.9
483,654 + 16495 mRNA_8127 0.32 -0.7
484,632 + 16495 mRNA_8127 0.70 0.7
484,891 + 16495 mRNA_8127 0.80 0.5
484,909 + 16495 mRNA_8127 0.80 0.9
485,034 - 16495 mRNA_8127 0.85 -0.7
485,328 - 0.8
485,332 - 1.2
485,334 - 0.8
485,469 - 1.4
485,499 - 0.7
485,501 + -0.4
485,503 - 0.3
485,568 + 0.9
485,601 + -0.0
485,672 + -0.1
485,707 + -0.3