Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8109

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8108: 16476 - K17637 EXOC2, SEC5 exocyst complex component 2, at 429862 to 433885 16476 mRNA_8109: 16477 - K00679 E2.3.1.158 phospholipid-diacylglycerol acyltransferase, at 434477 to 437050 16477 mRNA_8110: 16478 - HMMPfam-G protein-coupled glucose receptor regulating Gpa2-PF11710,SUPERFAMILY--SSF81321, at 437598 to 439156 16478

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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433,840 + -0.2
433,943 + 0.5
433,945 - -0.1
433,966 + -1.2
433,972 - 0.0
433,973 - -0.9
433,974 - 0.3
434,100 + 0.5
434,111 + 0.4
434,119 + 1.8
434,226 - 0.3
434,245 + -0.6
434,548 + -1.0
435,618 - 16477 mRNA_8109 0.44 0.6
436,013 - 16477 mRNA_8109 0.60 -0.5
436,154 + 16477 mRNA_8109 0.65 1.7
436,431 - 16477 mRNA_8109 0.76 0.5
436,599 + 16477 mRNA_8109 0.82 0.6
436,722 + 16477 mRNA_8109 0.87 2.2
436,865 - -0.2
436,953 - -0.0
436,962 - 0.9
437,009 - 0.1
437,051 + 0.0
437,068 + 1.9
437,140 - 1.2
437,167 - 0.9
437,182 + 3.0
437,185 + -0.4
437,190 - -1.5
437,191 + 1.4
437,195 + -0.4
437,203 + 1.6
437,204 - 0.1
437,207 - 3.0
437,208 - 1.9
437,210 - 0.1
437,213 - -1.4
437,238 - 0.4
437,253 + -1.8
437,272 - -0.3
437,278 + 0.3
437,280 + -0.4
437,298 - 0.7
437,306 + 0.2
437,309 + 2.1
437,310 + 0.1
437,337 + -0.2
437,338 - 1.9
437,365 + 1.6
437,379 + 0.5
437,382 + -0.7
437,382 - -0.9
437,390 - 0.4
437,395 + 0.7
437,395 - 0.1
437,407 - 1.5
437,413 + 3.2
437,421 - 0.7
437,423 - -0.0
437,425 + 1.6
437,426 + -0.7
437,428 + -0.4
437,470 + -1.5
437,474 - 0.4
437,477 + 1.2
437,483 - -0.2
437,485 - -0.4
437,490 + 0.0
437,496 + -0.4
437,500 + 2.6
437,508 + -0.1
437,512 + 0.6
437,516 + -0.6
437,518 + 0.6
437,521 + -1.2
437,527 - 2.0
437,529 - 1.4
437,533 + 2.6
437,539 - -0.1
437,539 + 1.8
437,546 + 0.8
437,570 - 0.2
437,594 + 3.4
437,676 - -0.9
437,688 + 1.6
437,737 - 0.2
437,830 + 16478 mRNA_8110 0.15 -0.9
437,834 + 16478 mRNA_8110 0.15 -0.0
437,976 - 16478 mRNA_8110 0.24 0.9
437,997 - 16478 mRNA_8110 0.26 0.9