Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8100

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8099: 16467 - HMMPfam-SUR7/PalI family-PF06687, at 416888 to 417757 16467 mRNA_8100: 16468 - BLAST DigA protein [Rhizoctonia solani AG-3 Rhs1AP], at 418661 to 419532 16468 mRNA_8101: 16469 - Hypothetical Protein, at 419844 to 420309 16469

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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418,229 + 0.3
418,392 - 1.6
419,350 - 16468 mRNA_8100 0.79 0.9
419,350 - 16468 mRNA_8100 0.79 1.7
420,105 - 16469 mRNA_8101 0.56 -0.4
420,108 - 16469 mRNA_8101 0.57 0.0
420,126 - 16469 mRNA_8101 0.61 0.2
420,274 - -1.0
420,390 - 1.6
420,393 + -0.2
420,404 - 0.9
420,432 + 0.6
420,437 - 2.0