Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8099

Experiments: YPD

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8098: 16466 - Hypothetical Protein, at 415217 to 416223 16466 mRNA_8099: 16467 - HMMPfam-SUR7/PalI family-PF06687, at 416888 to 417757 16467 mRNA_8100: 16468 - BLAST DigA protein [Rhizoctonia solani AG-3 Rhs1AP], at 418661 to 419532 16468

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Per-strain Table

Position Strand Gene Sysname Fraction YPD
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415,936 - 16466 mRNA_8098 0.71 0.2
416,125 + -0.2
416,323 - 0.4
416,324 + 1.2
416,337 - 0.5
416,402 + 0.2
416,414 + 0.4
416,426 + -0.4
416,454 - 0.8
416,509 + -0.1
416,511 - -0.9
416,531 - 0.2
416,543 - 1.8
416,562 - 2.7
416,563 - -0.1
416,568 + 1.9
416,576 + 1.5
416,578 - -0.1
416,591 + 0.1
416,700 + 1.3
416,702 - 0.6
416,718 - 1.3
416,862 + 2.9
416,875 - 0.5
417,005 + 16467 mRNA_8099 0.13 -0.3
417,293 - 16467 mRNA_8099 0.47 -1.1
417,487 - 16467 mRNA_8099 0.69 -0.1
418,229 + 0.3
418,392 - 1.6